Link: http://snras.blogspot.com/2014/03/bear-species-genetic-relationships.html
Bear species' genetic relationships determined
Matthew Cronin, professor of animal genetics with the UAF School
of Natural Resources and Extension and colleagues at the University
of California Davis and Delta G Co. published a paper on bear
genetics in the Journal of Heredity online in January. The paper,
which will be printed in the next few months, describes the research
involving genome sequence comparisons of the three bear species.
brown bear
Cronin also published papers on the relationships of the bears
with different genetic analyses in 2012 with a collaborator at the
U.S. Department of Agriculture in the Journal of Heredity, and in
2013 with co-workers at Texas Tech University in the Canadian
Journal of Zoology.
The 2014 paper replicates other research on bear genomes but
includes analysis of genetic variation in more than 300 bears from
Alaska and genetic elements not assessed previously in bears.
These are known as ultra-conserved elements, and show the polar
and brown bears to be more closely related than either is to black
bears.
The data was used in a “molecular clock” that uses the numbers
of differences (mutations) in DNA sequences to estimate when
the sequences, and hence the species, diverged. The data suggest
that polar bears and brown bears diverged as different species
1.2 million years ago, and black bears diverged from the
polar/brown bear lineage 2.3 million years ago. These estimates
are within the ranges in other studies.
Utilizing labs at the University of California Davis, Cronin and
technology experts pored over huge datasets. He also analyzed
tissue samples from Montana and from Alaska’s Admiralty,
Baranof and Chichagof islands, obtained from state and
federal wildlife agencies. In recent years DNA science has
improved so much that Cronin is able to study billions of
nucleotides of DNA rather than the thousands he used to
be limited to. “It’s very advanced because of the applications
in medicine and agriculture,” Cronin said.
“The ramifications are that if the polar bear was an independent
species for about 1 million years it survived previous cold and
warm periods,” Cronin said. “This means the polar bear has
been an independent lineage a long time through glacial and
interglacial and warm periods.”
The last glacial period was at maximum extent about 22,000
years ago, and was preceded by a warm interglacial period
about 130,000 years ago. Other warm and cold periods
preceded that. Cronin thinks that if polar bears survived
previous warm periods in which there was little or no arctic
summer sea ice, this should be used in models predicting
the species’ response to current climate change.
“It seems logical that if polar bears survived previous warm,
ice-free periods, they could survive another. This is of course
speculation, but so is predicting they will not survive, as the
proponents of the endangered species act listing of polar
bears have done.”
Cronin has been studying animal genetics for 25 years.
He recently researched wood bison and plains bison.
Comparing wolves in Southeast Alaska to species across
the country is his next area of research.
Matthew Cronin, professor of animal genetics with the UAF School
of Natural Resources and Extension and colleagues at the University
of California Davis and Delta G Co. published a paper on bear
genetics in the Journal of Heredity online in January. The paper,
which will be printed in the next few months, describes the research
involving genome sequence comparisons of the three bear species.
brown bear |
Cronin also published papers on the relationships of the bears
with different genetic analyses in 2012 with a collaborator at the
U.S. Department of Agriculture in the Journal of Heredity, and in
2013 with co-workers at Texas Tech University in the Canadian
Journal of Zoology.
The 2014 paper replicates other research on bear genomes but
The 2014 paper replicates other research on bear genomes but
includes analysis of genetic variation in more than 300 bears from
Alaska and genetic elements not assessed previously in bears.
These are known as ultra-conserved elements, and show the polar
and brown bears to be more closely related than either is to black
bears.
The data was used in a “molecular clock” that uses the numbers
The data was used in a “molecular clock” that uses the numbers
of differences (mutations) in DNA sequences to estimate when
the sequences, and hence the species, diverged. The data suggest
that polar bears and brown bears diverged as different species
1.2 million years ago, and black bears diverged from the
polar/brown bear lineage 2.3 million years ago. These estimates
are within the ranges in other studies.
Utilizing labs at the University of California Davis, Cronin and
Utilizing labs at the University of California Davis, Cronin and
technology experts pored over huge datasets. He also analyzed
tissue samples from Montana and from Alaska’s Admiralty,
Baranof and Chichagof islands, obtained from state and
federal wildlife agencies. In recent years DNA science has
improved so much that Cronin is able to study billions of
nucleotides of DNA rather than the thousands he used to
be limited to. “It’s very advanced because of the applications
in medicine and agriculture,” Cronin said.
“The ramifications are that if the polar bear was an independent
“The ramifications are that if the polar bear was an independent
species for about 1 million years it survived previous cold and
warm periods,” Cronin said. “This means the polar bear has
been an independent lineage a long time through glacial and
interglacial and warm periods.”
The last glacial period was at maximum extent about 22,000
The last glacial period was at maximum extent about 22,000
years ago, and was preceded by a warm interglacial period
about 130,000 years ago. Other warm and cold periods
preceded that. Cronin thinks that if polar bears survived
previous warm periods in which there was little or no arctic
summer sea ice, this should be used in models predicting
the species’ response to current climate change.
“It seems logical that if polar bears survived previous warm,
“It seems logical that if polar bears survived previous warm,
ice-free periods, they could survive another. This is of course
speculation, but so is predicting they will not survive, as the
proponents of the endangered species act listing of polar
bears have done.”
Cronin has been studying animal genetics for 25 years.
Cronin has been studying animal genetics for 25 years.
He recently researched wood bison and plains bison.
Comparing wolves in Southeast Alaska to species across
the country is his next area of research.
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